Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1445220	1445248	29	13 [0]	[0] 31	rcsC	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

ATTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCTT  >  minE/1445160‑1445219                                                            | aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:203238/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:221709/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:491506/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:586334/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:608381/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:667165/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:801055/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:815300/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:894259/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:894771/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:898267/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCtt  <  1:979551/60‑1 (MQ=255) aTTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGGCGGTTCCTGCCCtt  <  1:943340/60‑1 (MQ=255)                                                            | ATTTTTTACTCACTACCTCGTCAGTGATCAACACATCTTCGGGAGTCGGTTCCTGCCCTT  >  minE/1445160‑1445219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑