Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2380408	2380520	113	5 [0]	[0] 72	rmuC	predicted recombination limiting protein

CCACATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCG  >  minE/2380521‑2380575 |                                                       ccacATCTTTTCCCTGCGGCAGGCGCACGATGACa                      >  1:717772/1‑35 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCAt           >  1:1037471/1‑46 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:462295/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:714320/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:673633/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:570887/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:52961/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:507009/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:500041/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:48403/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:480056/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:715691/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:461211/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:456238/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:440158/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:425329/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:406011/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:399777/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:396287/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:383218/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:880073/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:974685/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:964462/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:926666/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:919346/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:91238/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:902491/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:898157/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:891426/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1015479/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:87605/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:853495/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:844907/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:821603/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:810467/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:720926/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:976610/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1156827/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:153092/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:130694/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:125688/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:123296/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1198781/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1187195/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1182731/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1168583/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:169307/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1125188/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1113463/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1112346/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1111806/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1100441/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1094616/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:1066223/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:286361/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:361231/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:350954/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:326112/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:317725/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:309715/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:302441/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:292503/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:372093/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:282159/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:265901/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:240057/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:229624/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:229436/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:21556/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:183345/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCg  >  1:171985/1‑55 (MQ=255) ccacATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGAATCCGCGAGCg  >  1:1074530/1‑55 (MQ=255) |                                                       CCACATCTTTTCCCTGCGGCAGGCGCACGATGACATCCGGCTGCATCCGCGAGCG  >  minE/2380521‑2380575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑