Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2661385	2661543	159	16 [0]	[1] 38	rtcR	sigma 54‑dependent transcriptional regulator of rtcBA expression

CCGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGC  >  minE/2661543‑2661605  |                                                              ccGCTAGT‑GCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:934756/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:892767/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:59561/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:598743/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:647173/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:661190/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:720638/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:765387/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:810444/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:811290/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:881553/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:479793/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:898312/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:943270/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:959609/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:962210/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:965966/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:969647/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:974657/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:136586/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:1012832/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:1046/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:1069216/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:109038/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:1155065/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:1157702/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:1169018/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:135762/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:1011495/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:155507/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:28646/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:29491/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:296141/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:342088/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:35233/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:366441/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:398570/62‑1 (MQ=255)  cGCTAGTGGCAAAGGTGGCCATCCGCGGGACGCTGGCAGAAAGTTCGCGAAAGTTACCgcgc  <  1:1081560/62‑1 (MQ=255)  |                                                              CCGCTAGTGGCAAAGGTGGCCATCCGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGC  >  minE/2661543‑2661605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑