Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	559492	559823	332	12 [0]	[0] 23	cmr	multidrug efflux system protein

AATGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCAA  >  minE/559824‑559883 |                                                            aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:558081/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:974187/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:944319/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:922969/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:885879/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:884532/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:851200/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:798507/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:77575/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:731754/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:693394/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:587372/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:1156139/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:525924/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:520458/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:454824/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:439033/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:428547/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:425925/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:404672/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:3561/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCaa  <  1:293231/60‑1 (MQ=255) aaTGCTGATCTTTACCGTTGGTATTGAAATCAGAAAACATGCCTGGCTGAACGGGGGCaa  <  1:301462/60‑1 (MQ=255) |                                                            AATGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCAA  >  minE/559824‑559883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑