Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	768437	768838	402	2 [0]	[0] 38	phoQ	sensory histidine kinase in two‑compoent regulatory system with PhoP

ACTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATC  >  minE/768839‑768899 |                                                             aCTTCGCAAGTGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:565972/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCTCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:324272/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:725903/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:519784/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:541608/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:609499/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:641495/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:666388/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:696978/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:705346/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:487215/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:783267/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:784008/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:792998/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:811316/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:81532/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:927822/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:932026/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:952722/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1122165/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:103495/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1040793/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:104260/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:104991/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1069709/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1084726/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1092469/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1113805/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1022338/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1166612/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:1166650/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:143883/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:151027/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:311440/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:339861/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:370816/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATc  <  1:431094/61‑1 (MQ=255) aCTTCGCAAGGGTATAGAACAGATTGCTCTCGACACGTAACAGCCGAAACGTAGTTTTATc  <  1:943666/61‑1 (MQ=255) |                                                             ACTTCGCAAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATC  >  minE/768839‑768899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑