Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1207852	1207868	17	58 [0]	[0] 31	manZ	mannose‑specific enzyme IID component of PTS

GCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTG  >  minE/1207869‑1207930 |                                                              gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATgg                          >  1:195385/1‑38 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACt   >  1:886659/1‑61 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACt   >  1:783737/1‑61 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACt   >  1:779831/1‑61 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACt   >  1:378716/1‑61 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACt   >  1:71693/1‑61 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACt   >  1:497122/1‑61 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:5368/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:961992/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:881045/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:782219/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:769386/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:755724/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:687882/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:618310/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:5802/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:1014170/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:501593/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:468574/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:453327/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:361098/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:213753/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:213120/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:16986/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:147752/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:126275/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:1097139/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:1074/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGAAGGCACTg  >  1:607338/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAACCTCATCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTg  >  1:580799/1‑62 (MQ=255) gCGTCTTCCTGCGTTCTAAACTCTTCCAGGGTTCATGGAACTTCGAACGt              >  1:927214/1‑50 (MQ=255) |                                                              GCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTG  >  minE/1207869‑1207930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑