Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1339156	1339195	40	56 [0]	[0] 63	wcaD	predicted colanic acid polymerase

TGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCC  >  minE/1339196‑1339257 |                                                              tGCCAATAATGATCACAATATAGACAAACAGCATAGt                           >  1:69196/1‑37 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:776876/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:40663/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:413619/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:43194/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:448866/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:456478/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:595528/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:611524/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:614574/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:656339/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:657016/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:732216/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:736610/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:74227/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:763275/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:379554/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:778506/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:782080/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:804572/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:817089/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:836459/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:89310/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:895551/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:89649/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:90565/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:918172/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:943856/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:962397/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:968361/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:973958/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:209009/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1059417/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1060892/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:109452/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1106659/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1124277/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1151426/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1176127/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1189568/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1190414/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:123322/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:179190/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:179818/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:20874/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:1010080/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:220120/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:35300/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:34180/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:318573/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:308769/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:305809/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:293958/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:28453/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:276213/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:275244/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:275039/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:246566/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:237624/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc  >  1:218025/1‑62 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATc   >  1:1148160/1‑61 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATc   >  1:911941/1‑61 (MQ=255) tGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATc   >  1:374243/1‑61 (MQ=255) |                                                              TGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCC  >  minE/1339196‑1339257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑