Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1489805	1489808	4	27 [0]	[0] 40	nuoL	NADH:ubiquinone oxidoreductase, membrane subunit L

CGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTG  >  minE/1489809‑1489870 |                                                              cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGt                >  1:527797/1‑48 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAg    >  1:239708/1‑60 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGt   >  1:1072892/1‑61 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGt   >  1:729536/1‑61 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGt   >  1:352213/1‑61 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGt   >  1:883433/1‑61 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGt   >  1:938704/1‑61 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGt   >  1:1097339/1‑61 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:90487/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:820577/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:81831/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:796390/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:777851/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:771588/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:766991/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:766136/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:1043451/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:689531/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:638707/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:62870/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:621798/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:963231/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:266484/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:1091995/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:15149/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:157409/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:207495/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:228933/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:235876/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:252999/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:558274/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:305435/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:319624/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:34650/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:374695/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:3752/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:405175/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:4448/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTg  >  1:471638/1‑62 (MQ=255) cGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAATg  >  1:902168/1‑62 (MQ=255) |                                                              CGCCATCGCACCCGCGAGGATCTCATCCTTACTGAAGAAGCCCGCAGTGACCAGCGGTAGTG  >  minE/1489809‑1489870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑