Predicted mutation
evidence seq id position mutation annotation gene description
RA minE 1,763,594 A→T noncoding (250/1542 nt) rrsG ← 16S ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE1,763,5940AT100.0% 135.7 / NA 83noncoding (250/1542 nt)rrsG16S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (0/83);  total (0/83)

Only 100 of 116 total aligned reads displayed.

GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTT  >  minE/1763532‑1763655
                                                              |                                                             
ggCTGGTCATCCTCTCAGACCAGCCAGGGATCGTCGCCTT‑GTGAGCCGTTACCCCACcaaca                                                               >  1:743105/1‑62 (MQ=14)
   gggTCATCCTCTCAGACCAGCCAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACcaacaa                                                              >  1:204332/2‑61 (MQ=255)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:47057/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:65265/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:646543/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:634116/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:592715/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:568658/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:534795/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:513782/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:501487/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:658724/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:465268/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:430869/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:427082/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:39537/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:385239/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:384510/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:369938/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:345890/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:335603/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:828837/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:983848/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:977353/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:970540/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:964980/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:953139/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:934381/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:887103/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:865806/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:862207/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:65594/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:817549/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:813975/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:808535/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:806286/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:72608/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:720721/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:710448/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:708110/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1021955/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1165344/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:199495/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:194948/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:171700/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:167011/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:319027/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:139398/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:126877/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:125909/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1184170/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1174389/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:152681/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1155621/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1148843/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1127182/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1124781/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1060346/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1032448/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1031519/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1027279/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1019923/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:260011/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:299234/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:213640/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:285142/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:218049/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:219469/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:224994/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:233724/61‑3 (MQ=11)
             ctcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:264185/61‑3 (MQ=11)
              tcAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCATCTAGCTATTccga                                                    <  1:250073/60‑3 (MQ=2)
                aGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1148326/58‑3 (MQ=11)
                           ggATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:660922/47‑3 (MQ=11)
                           ggATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATccga                                                    <  1:1093969/47‑3 (MQ=11)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:935102/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:850638/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:263841/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:885834/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:887211/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:420818/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:968807/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:301199/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:328226/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:404875/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:406673/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:788065/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:755333/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:1178666/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:74196/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:734703/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:249870/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:448630/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:652326/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:180778/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:216719/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:625123/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:547725/62‑1 (MQ=31)
                                                              aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCATCTTTGGTCtt  <  1:1128549/62‑1 (MQ=14)
                                                              aaGCTAATCCCATCTGGGCACATCCGATCGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCtt  <  1:377493/62‑1 (MQ=14)
                                                              |                                                             
GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTT  >  minE/1763532‑1763655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑