Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2170346	2170433	88	43 [0]	[0] 42	rpoN	RNA polymerase, sigma 54 (sigma N) factor

GGAAGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCT  >  minE/2170283‑2170345                                                               | ggAAGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTT‑AAGCCGTCCt  <  1:2136504/62‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGGCGAAGTTGAAGCCGTCCt  <  1:1299302/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:375728/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:257940/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2677783/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2703287/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2734239/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2915337/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:3186318/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:3215679/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:3219168/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:3272236/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:241728/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:4106/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:618148/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:651995/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:856317/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:874824/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:923748/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:939057/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:939683/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:962245/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1854164/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1246346/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1269317/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1370031/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:139623/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1413762/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1453538/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1520368/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1612703/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:177194/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2561771/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1906842/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1993583/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2122239/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2213273/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2226979/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2340208/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1204928/60‑1 (MQ=255)    aGATATTCTCGAAAGTATAGGCGATGAAGAGATCGAAATCGACGAAGTTGAAGCCGTCCt  <  1:3159802/60‑1 (MQ=255)      atatTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:2280712/58‑1 (MQ=255)                aaGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCt  <  1:1297977/48‑1 (MQ=255)                                                               | GGAAGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCT  >  minE/2170283‑2170345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑