Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2240150	2240219	70	66 [1]	[0] 52	zraS	sensory histidine kinase in two‑component regulatory system with ZraR

CGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATGAAGAATAATGATGCCCTGCGCATCGGTGACTGCGAACCACAACACTCCCGG  >  minE/2240108‑2240200                                          |                                                    cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2872549/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:371868/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:36919/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:357174/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:350185/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:3265228/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:324226/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2945573/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2944335/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:390047/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2730151/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2717099/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2694518/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2681794/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2558787/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2535886/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1013543/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2483546/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:390500/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:466269/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:517878/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:526709/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:638317/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:646043/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:673834/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:685131/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:687751/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:773088/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:843330/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:856773/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:861833/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:868825/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:944786/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1707074/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1079591/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:119161/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1276322/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1286556/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1439164/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1442959/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1457682/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1468353/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1487500/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1524872/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1556978/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1589424/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1629492/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1637275/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2196321/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2475692/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:245092/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2418846/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2302680/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2280079/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:222335/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1797461/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2162120/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2146920/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2110887/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:203542/1‑42 (MQ=255) cGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:190350/1‑42 (MQ=255) cGGCGAATAGAGCGAACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1649925/1‑42 (MQ=255) cGGCGAATAGAGCCCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:1467054/1‑42 (MQ=255) cGGCGAATAGAGAGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:3190387/1‑42 (MQ=255) cGGCGAATAGAGAGCACGCCCGACCTTATCGGGGTCGCTATg                                                     >  1:2455881/1‑42 (MQ=255)                                gggTCGCTATGAAGAATAATGATGCCCTGCGCATCGGTGACTGCGAACCACAACACTCCCgg  >  1:2483329/1‑62 (MQ=255)                                          |                                                    CGGCGAATAGAGCGCACGCCCGACCTTATCGGGGTCGCTATGAAGAATAATGATGCCCTGCGCATCGGTGACTGCGAACCACAACACTCCCGG  >  minE/2240108‑2240200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑