Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2308288	2308288	1	7 [0]	[0] 3	cytR	DNA‑binding transcriptional dual regulator

GCACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTT  >  minE/2308226‑2308287                                                              | gcACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGttt  <  1:1136857/62‑1 (MQ=255) gcACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGttt  <  1:2623621/62‑1 (MQ=255) gcACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGttt  <  1:393313/62‑1 (MQ=255) gcACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGttt  <  1:431594/62‑1 (MQ=255) gcACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGttt  <  1:495993/62‑1 (MQ=255)    cTTTCTCAGGCAAAACGCAAGGGGCTGAAAGGCCCGGAAGACCTTTCCATAATCGGttt  <  1:393311/59‑1 (MQ=255)                           gCTGAAAGTCCCGGAAGACCTTTCCATAATCGGttt  <  1:2357192/36‑1 (MQ=255)                                                              | GCACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTT  >  minE/2308226‑2308287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑