Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2345141	2345153	13	66 [0]	[0] 35	glnG/hemN	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)/coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent

CCTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCA  >  minE/2345079‑2345140                                                              | ccTACAAAAGGAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2260543/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:3133898/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2220758/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1091778/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:235453/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2495436/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:254751/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2744591/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2770797/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2816366/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2874262/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2940596/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2954740/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:3037540/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:3099916/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:3121834/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2258342/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:342896/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:374639/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:433111/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:517562/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:598875/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:613707/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:655125/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:744338/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:781736/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:788819/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:833465/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:837399/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:83983/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:952129/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:969104/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2157791/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1133728/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:116687/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1182584/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1246602/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1409341/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1433214/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1451454/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1566193/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1590236/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1593433/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:159551/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1631739/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1636120/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1636137/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1639688/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1660762/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1663281/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1712182/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1883892/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:189284/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2206988/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2009893/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2149080/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2023710/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:21336/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2106306/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2126120/62‑1 (MQ=255) ccTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCCCATCAGGCAATCTTGTTCTCa  <  1:2902807/62‑1 (MQ=255)  cTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:3218013/61‑1 (MQ=255)  cTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1349573/61‑1 (MQ=255)             ataatTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:1993/50‑1 (MQ=255)                  ttCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:2104640/45‑1 (MQ=255)                       cAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCa  <  1:726568/40‑1 (MQ=255)                                                              | CCTACAAAAGCAATAATTTCAACAGGTTTTGTTGCCCAGCGCATCAGGCAATCTTGTTCTCA  >  minE/2345079‑2345140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑