Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2403683	2403690	8	81 [0]	[0] 11	dapF	diaminopimelate epimerase

CGCACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAT  >  minE/2403621‑2403682                                                              | cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2331742/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2948237/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2877590/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2826127/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2804776/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2723036/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2709017/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2608112/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2428016/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2372876/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2995939/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2315078/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2300979/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2217605/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2175331/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1074739/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2095194/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2056599/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2053797/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:629313/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:948811/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:895981/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:854510/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:762090/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:740275/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:729758/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:701707/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:645153/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2158744/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:585817/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:572261/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:430284/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:424049/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:367588/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:3270540/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:3195547/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:3143919/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1357300/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1539402/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1530485/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1485046/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1199461/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1211131/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1458559/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1397207/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1395614/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1581957/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1352088/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1325371/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:12163/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1281716/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1319930/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1316543/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1290/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1859687/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2044985/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:199744/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1982492/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1980447/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1184667/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1966849/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1936137/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1596484/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1841907/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1193370/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1701070/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1196301/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1697386/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1696633/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1635356/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTCAAAATGCGATAGTGAAAAt  <  1:518912/62‑1 (MQ=255) cgcACCGTTGCCGCACTGCGCCACTTCAATGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2316721/62‑1 (MQ=255)  gcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1137333/61‑1 (MQ=255)  gcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:457816/61‑1 (MQ=255)  gcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:437241/61‑1 (MQ=255)  gcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:3024150/61‑1 (MQ=255)  gcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2380036/61‑1 (MQ=255)  gcACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:1976468/61‑1 (MQ=255)            cGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:3085241/51‑1 (MQ=255)                cTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:205337/47‑1 (MQ=255)                         ttCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAt  <  1:2571745/38‑1 (MQ=255)                                                              | CGCACCGTTGCCGCACTGCGCCACTTCACTGCCATCAGCATTGAAAATGCGATAGTGAAAAT  >  minE/2403621‑2403682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑