Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2611904	2611935	32	29 [0]	[0] 81	nikB	nickel transporter subunit

GCGCCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAC  >  minE/2611843‑2611903                                                             | gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGTCGAGCAc  <  1:1552528/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2954428/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:599289/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:526785/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:515568/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:449759/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:367238/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:347020/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:329701/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:3230800/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:3229237/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:320151/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:3050087/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2976564/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2974783/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2959287/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:1251847/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2841918/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2649103/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2484637/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2320424/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2307257/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2069425/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:2031702/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:1848065/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:1846448/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:1816537/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:1610810/61‑1 (MQ=255) gcgcCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAc  <  1:1511725/61‑1 (MQ=255)                                                             | GCGCCGGGTCGCCGGTACCGAGGCGCAGCATCAGAAAAATGATCACCGAGGCGGCGAGCAC  >  minE/2611843‑2611903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑