Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2626938	2627033	96	41 [0]	[0] 26	rpoH	RNA polymerase, sigma 32 (sigma H) factor

GGCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGCAC  >  minE/2626876‑2626937                                                              | ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2900221/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1079384/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2494466/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2521157/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2582989/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2597608/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2598976/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2686437/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2790437/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2828493/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2471447/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:308887/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:3104716/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:3242296/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:471939/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:521898/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:57748/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:581624/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:941256/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:230851/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1298585/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:131782/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1343869/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1413874/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1448454/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:15093/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1704069/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1705882/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1890190/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1909383/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:193467/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:1980338/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2101634/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2109694/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2170757/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2177658/62‑1 (MQ=255) ggCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2357558/62‑1 (MQ=255)  gCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2117936/61‑1 (MQ=255)         aaCTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:303081/54‑1 (MQ=255)         aaCTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:448351/54‑1 (MQ=255)                      cAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGcac  <  1:2917614/41‑1 (MQ=255)                                                              | GGCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGCAC  >  minE/2626876‑2626937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑