Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2662363	2662434	72	9 [0]	[0] 28	rtcR	sigma 54‑dependent transcriptional regulator of rtcBA expression

TGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATAA  >  minE/2662302‑2662362                                                             | tGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:1120400/61‑1 (MQ=255) tGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:1200057/61‑1 (MQ=255) tGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:1981694/61‑1 (MQ=255) tGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:2249914/61‑1 (MQ=255) tGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:2553285/61‑1 (MQ=255) tGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:372403/61‑1 (MQ=255) tGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:795549/61‑1 (MQ=255) tGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:860632/61‑1 (MQ=255) tGGCGTTCCTCGGCAAAGCGGATGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATaa  <  1:835330/61‑1 (MQ=255)                                                             | TGGCGTTCCTCGGCAAAGCGGCTGGCGATGGCGTTATAACGGCTTAAATCGAGATCGATAA  >  minE/2662302‑2662362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑