Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	248932	248942	11	31 [0]	[0] 63	brnQ	predicted branched chain amino acid transporter

GTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTG  >  minE/248870‑248931                                                              | gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2317416/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:987865/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:906873/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:86878/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:861127/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:481328/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:3273608/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:314185/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2878263/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2873778/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2728335/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2606916/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2593011/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2573447/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2550871/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1071917/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:229981/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2265341/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:223082/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2151132/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:2069410/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1981511/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1774353/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1668470/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1546542/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1415509/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1393762/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1351162/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:1295173/1‑62 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:112576/1‑62 (MQ=255) gTTAAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCgcctg  >  1:29538/1‑62 (MQ=255)                                                              | GTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTG  >  minE/248870‑248931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑