Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2859925	2859939	15	62 [0]	[0] 62	mutL	methyl‑directed mismatch repair protein

GCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCA  >  minE/2859864‑2859924                                                             | gcgATCGCCTGATCAATCACTCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:208315/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCGGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:120737/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:3107861/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:542064/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:519032/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:497669/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:331864/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:3196390/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:3175598/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:311898/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:545857/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:3100701/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:3089277/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:3073514/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:3036318/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:300605/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2967097/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2756429/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:604116/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:607053/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:611988/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:647168/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:659156/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:678643/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:69315/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:705446/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:715084/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:784880/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:888286/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:894485/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:970096/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:995958/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1818883/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1015455/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1137823/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1250757/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1468982/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1495757/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1595606/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1619816/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1635448/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1671347/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:17342/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1741613/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:18009/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1809738/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2857480/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1843115/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1843889/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1871480/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1931448/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1999069/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2001373/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2355824/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2364887/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:239432/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2514883/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2643376/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:2673695/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:1014266/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGCGGGCCGATCa  >  1:1612088/1‑61 (MQ=255) gcgATCGCCTGATCAATCACGCGATCCGACAGGCCTGCGAAGACAAACTGGGGGCCGATCa  >  1:267293/1‑61 (MQ=255)                                                             | GCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCA  >  minE/2859864‑2859924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑