Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	57560	57588	29	3 [1]	[0] 55	rluA	pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)

AGAATCGGATGACCCAGCGCCAGCATATGCACACGCAATTGATGCGAACGCCCGGTAATCGGTTTTAACACCACTCTTGCCGTGT  >  minE/57498‑57582                                                              |                        agaATCGGATGACCCAGCGCCAGCATATGCACACGCAATTGATGCGAACGCCCGGTAATCgg                         >  1:3283788/1‑62 (MQ=255) agaATCGGATGACCCAGCGCCAGCATATGCACACGCAATTGATGCGAACGCCCGGTAATCgg                         >  1:78994/1‑62 (MQ=255)                        cATATGCACACGCAATTGATGCGAACGCCCGGTAATCGGTTGTAACACCACTCTTGCCgtgt  <  1:2998249/62‑1 (MQ=255)                                                              |                        AGAATCGGATGACCCAGCGCCAGCATATGCACACGCAATTGATGCGAACGCCCGGTAATCGGTTTTAACACCACTCTTGCCGTGT  >  minE/57498‑57582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑