Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	973970	974079	110	92 [0]	[0] 6	lsrB	AI2 transporter

CGCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCA  >  minE/973909‑973969                                                             | cGCACAAGCCGCAGAAAACTTGAAATATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:940518/61‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3196077/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1010197/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:318328/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3168653/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3161917/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3117242/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3107754/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3100572/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3034743/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3014970/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2998886/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2971095/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:295638/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2888903/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2860318/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:285344/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2837002/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2800315/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2750163/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2740027/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2699972/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2686018/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2649818/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:647138/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:916613/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:888513/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:881538/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:873186/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:825088/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:80295/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:775952/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:758084/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:744987/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:647866/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3225542/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:587744/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:552848/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:507933/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:449312/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:425533/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3265308/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3258412/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3238702/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3236559/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:3229411/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1304390/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1818990/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2633688/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:173999/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1718814/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1716226/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1623625/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1615296/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1598688/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:153370/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1356909/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1816453/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:129699/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1218962/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:116386/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1107500/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1087139/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1037591/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1034556/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1025612/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1015492/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1014515/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2295312/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2580331/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2528484/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2497272/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2409429/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2373008/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2309065/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1850144/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2269796/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2255482/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:220170/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2103609/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2071233/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1970536/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1910946/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1896635/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1884684/60‑1 (MQ=255)  gCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1884159/60‑1 (MQ=255)   cacaAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:35383/59‑1 (MQ=255)   cacaAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1192309/59‑1 (MQ=255)   cacaAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:1158307/59‑1 (MQ=255)   cacaAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2481617/59‑1 (MQ=255)                    ttGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2540945/42‑1 (MQ=255)                          aaTGACAAAGTAGCGATTGTCGGATTCAGTACGCCa  <  1:2504322/36‑1 (MQ=255)                                                             | CGCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCA  >  minE/973909‑973969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑