Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1069102	1069195	94	85 [0]	[0] 52	[cfa]	[cfa]

ACAAAGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGAAA  >  minE/1069040‑1069101                                                              | acaAAGCCCAAAAAGCG‑‑TACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:936882/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2699884/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:3273195/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:3265478/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:3181047/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:3122423/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:3051084/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2910204/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2878898/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2825348/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2824380/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2726530/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:3293514/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:268597/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2650462/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2639646/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2568026/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:253358/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2531501/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2496632/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2446057/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:242519/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:577179/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:952821/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:820656/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:755680/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:745110/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:743768/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:696437/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:691727/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:639311/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:633353/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2419118/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:573985/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:572352/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:555418/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:472695/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:458084/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:452011/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:420392/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:397066/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:366157/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1301338/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:170879/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1675751/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1671300/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1607091/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1514014/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1507455/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1478880/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:14382/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1317129/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:131125/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1710446/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:127278/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1271067/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1264340/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1230998/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1212631/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1167497/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1164107/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1079172/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1025004/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2090542/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2372367/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2368547/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:236699/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2310286/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2267992/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2248413/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2194198/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2175648/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2161196/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1005728/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2070611/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2020340/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1996262/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1977939/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1939991/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1916918/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1853413/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1749789/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:1734319/60‑1 (MQ=255)   aaaGCCCAAAAAGCGTCTACGCTG‑TTTAAGGTTCTGATCACCGACCAGTGATGGAGaaa  <  1:2542870/59‑1 (MQ=255)    aaGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGtaa  <  1:1709628/59‑1 (MQ=255)                                                              | ACAAAGCCCAAAAAGCGTCTACGCTGTTTTAAGGTTCTGATCACCGACCAGTGATGGAGAAA  >  minE/1069040‑1069101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑