Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1217425	1217457	33	40 [0]	[0] 4	prc	carboxy‑terminal protease for penicillin‑binding protein 3

AAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAA  >  minE/1217363‑1217424                                                              | aaGATTTCTGAAGCCGAAGCACTTAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:651190/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCAGCAGCGGGCCTTTATAGaa  >  1:1429844/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:53167/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2749894/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2909038/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2999582/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:3004208/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:3074629/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:3093343/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:3095712/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:3213841/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:3259114/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:271948/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:559002/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:615557/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:628225/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:762651/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:853205/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:93727/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:986534/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:1769505/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:1112452/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:1269619/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:1275084/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:1291665/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:1400895/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:158896/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:159974/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:1723527/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:1103098/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2281736/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2299576/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2305582/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2307038/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2466066/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:256561/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2591517/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2632143/1‑62 (MQ=255) aaGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:2705156/1‑62 (MQ=255) aaGATTTCTGAAGCAGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGaa  >  1:773713/1‑62 (MQ=255)                                                              | AAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAA  >  minE/1217363‑1217424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑