Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1219052	1219183	132	96 [0]	[0] 109	proQ	predicted structural transport element

TTCTTTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGC  >  minE/1219001‑1219051                                                   | ttcttTGCGGCTTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:238371/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:282337/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3241114/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3155503/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3121800/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3098012/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3018160/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2970074/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:294166/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2860749/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2860268/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2841335/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2828031/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3265768/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:281484/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2801835/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2769627/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2718004/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2717062/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2704774/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2675048/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2669829/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1053905/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2654208/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:606625/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:978584/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:977771/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:868588/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:840/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:803385/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:793039/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:783529/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:768097/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:659369/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:653978/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:618744/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2662021/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:468373/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:436192/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:405371/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:379322/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:37182/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:340216/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:339223/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3289722/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3285180/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:3281562/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1524984/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1793176/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1782842/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1781035/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1770780/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1731041/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1720707/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1718317/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1661921/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1643825/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1605530/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1540216/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1807776/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1522845/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1518580/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1516169/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1364651/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1299168/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1286548/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1197052/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1120514/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1117214/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1060433/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1060107/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2136682/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2594132/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2591725/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2519380/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2407890/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2360294/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2340410/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2307893/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2301836/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2279160/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:218803/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2140639/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2627781/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:2054596/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:201185/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1980897/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1937914/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1918964/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:187139/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1858680/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGc  >  1:1836356/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCCGTGc  >  1:2834162/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCACGGCGCGGTGc  >  1:314786/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGATCGCGGCGCGGTGc  >  1:2875832/1‑51 (MQ=255) ttcttTGCGGCGTGGCGTAGTCGGACGTGGCTTGAGTTCGCGGCGCGGTGc  >  1:347315/1‑51 (MQ=255)                                                   | TTCTTTGCGGCGTGGCGTAGTCGGACGTGGCTTGCGTTCGCGGCGCGGTGC  >  minE/1219001‑1219051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑