Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1226766	1226804	39	98 [0]	[0] 52	pphA	serine/threonine‑specific protein phosphatase 1

CTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAA  >  minE/1226704‑1226765                                                              | cTTTGCGGCCTACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2328494/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCcaa  <  1:2994372/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2673590/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:3148032/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:3070667/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2977007/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2966358/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2869391/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2852432/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2816508/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2733769/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2705623/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:3251832/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2663184/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2556576/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2542085/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1009453/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2292482/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2261075/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2251351/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2244141/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:653244/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:952731/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:923388/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:896838/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:890882/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:844303/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:843295/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:794221/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:773529/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:688311/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:686088/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2374460/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:631138/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:626237/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:57054/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:566705/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:540000/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:408493/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:391146/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:380088/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:347015/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1396947/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1727611/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1712874/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1701283/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1675470/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1649721/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1629367/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1600795/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1506948/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:150274/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1427999/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1426749/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2198131/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1379441/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1359613/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1318578/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:127000/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1200362/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1197968/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1187630/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1141052/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1086070/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1062392/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1741595/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2195339/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2194624/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:186798/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2156746/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2156694/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2106377/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1870204/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2090966/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2071340/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2022874/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGAGCaaa  <  1:2786767/62‑1 (MQ=255) cTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCACCACGGATCaaa  <  1:853008/62‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1723712/61‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:709312/61‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2395215/61‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1442730/61‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1997469/61‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1759029/61‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1839820/61‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:3276582/61‑1 (MQ=255)  tttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:349669/61‑1 (MQ=255)     tcGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2761974/57‑1 (MQ=255)         cccACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2272007/54‑1 (MQ=255)         cccACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:1317383/54‑1 (MQ=255)           cACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATaaaa  <  1:2233965/52‑1 (MQ=255)              gatctatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:353320/49‑1 (MQ=255)                 cgatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:193006/46‑1 (MQ=255)                       cGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:805812/40‑1 (MQ=255)                         tctcCAACTGAGATAAGTAAATGTCGCCACGGATCaaa  <  1:428850/38‑1 (MQ=38)                          ctcCCACTGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:2387770/37‑1 (MQ=255)                           tcCCACTGAGATAATTAAATCTCGCCACGGATCaaa  <  1:2797933/36‑1 (MQ=255)                            cccAATGAGATAAGTAAATCTCGCCACGGATCaaa  <  1:678211/35‑1 (MQ=255)                                                              | CTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAA  >  minE/1226704‑1226765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑