Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1449211	1449212	2	25 [0]	[0] 9	atoS	sensory histidine kinase in two‑component regulatory system with AtoC

GGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGA  >  minE/1449149‑1449210                                                              | gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:240303/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:767697/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:691393/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:56147/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:3191859/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2946977/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:290559/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2868739/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2756683/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2602609/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2587722/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2457585/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:125200/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2301869/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2300193/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:2051927/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:199561/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:1981119/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:1823936/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:1782480/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:1762175/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:159299/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:1564953/62‑1 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:1478961/62‑1 (MQ=255)     aaaTTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGa  <  1:298059/58‑1 (MQ=255)                                                              | GGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGA  >  minE/1449149‑1449210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑