Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1476564	1476565	2	9 [0]	[0] 20	inaA	conserved hypothetical protein

CAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAA  >  minE/1476508‑1476563                                                        | cAAGAAAACCATCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:2485920/56‑1 (MQ=255) cAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:2457488/56‑1 (MQ=255) cAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:2708028/56‑1 (MQ=255) cAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:2736522/56‑1 (MQ=255) cAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:344021/56‑1 (MQ=255) cAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:791477/56‑1 (MQ=255)  aaGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:3133686/55‑1 (MQ=255)  aaGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:936759/55‑1 (MQ=255)                      tACCTTCTGTTTTCACATAGATATGGCGAACATaa  <  1:200398/35‑1 (MQ=255)                                                        | CAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAA  >  minE/1476508‑1476563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑