Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1491472	1491489	18	65 [0]	[0] 2	nuoJ	NADH:ubiquinone oxidoreductase, membrane subunit J

ACGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAC  >  minE/1491410‑1491471                                                              | tcGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2484155/61‑1 (MQ=255) acGTGGAAGGCCACATCCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1205081/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGATCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1169889/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2641611/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:3148271/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:3117230/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:308598/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:3036744/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2928268/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2915824/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2828801/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2806943/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:3242712/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2547562/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2545510/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2383408/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2358197/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:3188062/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1126165/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:346020/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:36627/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:466588/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:491707/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:571238/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:660944/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:665222/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:743793/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:7884/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:792865/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:807191/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:863038/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2355729/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1175187/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1213352/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1307662/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1415242/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1424962/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1476604/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1494590/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1165876/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1501200/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1520376/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1559582/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1569531/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1578832/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1598377/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1643366/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1665672/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1702926/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1724774/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1827749/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1945679/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1965697/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1969369/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:224161/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2275975/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2294968/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGATCCACCGCCAGTAc  <  1:2934004/62‑1 (MQ=255) acGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCAAAGAAGCCAGTTCCACCGCCAGTAc  <  1:3133255/62‑1 (MQ=255)  cGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:1073225/61‑1 (MQ=255)  cGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:728447/61‑1 (MQ=255)           ccACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:944312/52‑1 (MQ=255)                  cAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2309119/45‑1 (MQ=255)                      ccTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:2827586/41‑1 (MQ=255)                           gAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAc  <  1:487617/36‑1 (MQ=255)                                                              | ACGTGGAAGGCCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTAC  >  minE/1491410‑1491471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑