Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1520610	1520631	22	2 [0]	[0] 6	truA	pseudouridylate synthase I

GTGGCGCTAAATCGGGCATGAAAATCATCAGGTACAGTTTTAACCCAACGCACAGCGATGTC  >  minE/1520548‑1520609                                                              | gTGGCGCTAAATCGGGCATGAAAATCATCAGGTACAGTTTTAACCCAACGCACAGCGATGTc  >  1:2493548/1‑62 (MQ=255) gTGGCGCTAAATCGGGCATGAAAATCATCAGGTACAGTTTTAACCCAACGCACAGCGATGTc  >  1:2641684/1‑62 (MQ=255)                                                              | GTGGCGCTAAATCGGGCATGAAAATCATCAGGTACAGTTTTAACCCAACGCACAGCGATGTC  >  minE/1520548‑1520609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑