Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1528123	1528216	94	35 [0]	[0] 8	trmC	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme

GCGGCGTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCA  >  minE/1528061‑1528122                                                              | gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:405569/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:2513095/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:2607678/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:2624654/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:2947933/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:295650/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:310862/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:3213253/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:380632/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:2301603/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:440479/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:468546/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:498029/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:548519/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:796337/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:82704/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:942118/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:2278388/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1105622/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1213826/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1297427/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1307296/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1337695/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1351216/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1365647/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1466723/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1477644/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1507020/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1528182/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1745244/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1982851/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:2195259/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:226256/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCa  >  1:1021073/1‑62 (MQ=255) gcggcgTCACGCAGTTAGGCTGGGATGAGAAAAGACAGCATAAAATCGCACAGATGTTGTCa  >  1:404442/1‑62 (MQ=255)                                                              | GCGGCGTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCA  >  minE/1528061‑1528122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑