Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1777716	1777754	39	26 [0]	[0] 47	trmD	tRNA (guanine‑1‑)‑methyltransferase

TTGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCG  >  minE/1777654‑1777715                                                              | ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2717109/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:977555/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:817247/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:395680/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:332559/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:3219879/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:3180940/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:3099766/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2970372/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:283607/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2792673/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2787102/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:1079050/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2693267/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2655386/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2631714/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2627975/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:2502941/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:1838410/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:1615421/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:1519823/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:151433/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:1496539/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:1353772/62‑1 (MQ=255) ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:1312498/62‑1 (MQ=255)                aTCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCg  <  1:623216/47‑1 (MQ=255)                                                              | TTGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCG  >  minE/1777654‑1777715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑