Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2224432	2224443	12	2 [0]	[0] 26	prmA	methylase for 50S ribosomal subunit protein L11

TTTTCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTGG  >  minE/2224444‑2224504 |                                                             ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:246067/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:930999/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:875682/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:760891/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:732761/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:568521/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:3237124/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:2969547/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:2912923/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:2702089/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:2634074/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:2591560/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:2561820/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1173363/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:2302732/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:2287939/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:204214/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1893141/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1808194/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1793847/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1789860/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1766848/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1675719/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1413833/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1407090/61‑1 (MQ=255) ttttCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTgg  <  1:1319147/61‑1 (MQ=255) |                                                             TTTTCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTGG  >  minE/2224444‑2224504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑