Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2258076	2258115	40	13 [0]	[0] 55	rpoB	RNA polymerase, beta subunit

ATTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGA  >  minE/2258116‑2258177 |                                                              aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCg   >  1:980442/1‑61 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCg   >  1:630781/1‑61 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:287196/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2866507/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2910391/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2968346/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2977386/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:3055601/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:3105414/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:3145937/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:3233138/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:413072/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:454836/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:46040/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:507048/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:533120/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:539460/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:566859/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:572281/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:60057/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:708924/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:760020/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:786504/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:794454/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:817013/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:839774/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:918582/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2299198/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1402621/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1501831/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1502100/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1560612/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1564647/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:160834/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:16830/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1700257/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1788041/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1975137/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2047401/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2150661/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2209212/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:1388054/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2314074/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2339191/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2364792/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2463745/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2520720/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2540284/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2589729/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2659258/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2668168/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2685714/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2754416/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGa  >  1:2851670/1‑62 (MQ=255) aTTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGAACGCGCGGCAGTTTGTCGa  >  1:479302/1‑62 (MQ=255) |                                                              ATTTTGTTTCTCTTCGTCTGTCAGGCCCAGCTCCAGCCAGCGATCGCGCGGCAGTTTGTCGA  >  minE/2258116‑2258177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑