Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2341403	2341410	8	6 [0]	[1] 82	glnA	glutamine synthetase

TCTAAAAACGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTG  >  minE/2341404‑2341466        |                                                        tCTAAAAACGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCa         <  1:1929093/56‑1 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCa                       >  1:1393938/1‑35 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCt   >  1:1022435/1‑55 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2994906/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:462170/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:39607/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:386918/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:335008/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:3223330/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:3195589/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:3089115/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:3060035/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:3001380/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:476657/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2954988/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2924426/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2898099/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2874362/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2849763/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2794515/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2790182/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2755975/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2735152/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:670783/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:887332/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:870450/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1022253/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:82517/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:782302/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:778420/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:750939/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:736214/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:71501/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:896066/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:638913/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:636220/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:588823/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:586622/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:504964/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:493096/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:483755/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:962416/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1632566/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1941702/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:186702/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1865587/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1748829/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1728538/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1710604/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1650456/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:164732/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1638037/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2703968/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1624558/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1553564/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1523169/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1512727/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:140421/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1238998/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1192626/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1133229/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:109800/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2347575/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2713627/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2600841/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2579300/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2557505/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2489678/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2459594/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2448688/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2381244/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2282678/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2277191/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2244709/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:217168/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2074059/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:2030577/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1982593/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1981481/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTg  >  1:1960879/1‑56 (MQ=255)        aCGGCGTTAACCTGTTCGCAGGCGACAAATACGAAGGTCTGTCTGAGCAGGCGCTg  >  1:194626/1‑56 (MQ=255)        aCGGCGATAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAgg       >  1:2845769/1‑51 (MQ=255)        |                                                        TCTAAAAACGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTG  >  minE/2341404‑2341466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑