Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2499908	2499917	10	39 [0]	[0] 46	uhpA	DNA‑binding response regulator in two‑component regulatory system wtih UhpB

CGTCAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGC  >  minE/2499918‑2499979 |                                                              cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCgg                        >  1:1172359/1‑40 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAGGGAATGGc  >  1:1473221/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:2585054/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:773983/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:328244/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:286527/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:1205793/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:1257853/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:1346168/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:486202/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:202214/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:198937/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:427176/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:1740636/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATgg   >  1:1875151/1‑61 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2949443/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:3143903/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2976514/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2720790/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2860763/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1133007/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:3248547/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:339781/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:452269/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:456035/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:563666/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:630609/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:916965/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2698418/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1016849/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1140673/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1150955/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1401476/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1455905/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1462469/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1505099/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:1967031/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2069846/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2234244/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2594507/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2617516/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2657761/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2692671/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:2720057/1‑62 (MQ=255) cgtcAGGACCCGCTAACCAAACGTGAACGCCACGTGGCGGAAAAACTGGCCCAAGGCATg    >  1:1160329/1‑60 (MQ=255) cgtcAGGACCAGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGc  >  1:954441/1‑62 (MQ=255) |                                                              CGTCAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGC  >  minE/2499918‑2499979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑