Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2865464	2865499	36	7 [0]	[0] 47	hflC	modulator for HflB protease specific for phage lambda cII repressor

AGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCG  >  minE/2865500‑2865561 |                                                              agCGCGTAACGGCTGAGACGGAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2862069/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGATGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1389451/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:570911/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2880107/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2978312/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:302555/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:3040386/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:3173617/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:3185425/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:3200906/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:37207/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:372106/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:472386/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:484532/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2841468/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:629563/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:696769/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:768655/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:775770/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:82726/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:844328/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:943095/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:946784/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:988593/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:993579/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1721742/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1269083/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1439175/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1441102/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1483783/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1493059/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1504435/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:151746/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1535876/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1627674/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1689776/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1128815/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1806067/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:1943486/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2083632/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2136773/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2166046/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2270110/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2324555/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2338567/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2640035/62‑1 (MQ=255) agCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGgcggcg  <  1:2719129/62‑1 (MQ=255) |                                                              AGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCG  >  minE/2865500‑2865561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑