Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	288898	288952	55	86 [0]	[0] 92	lon	DNA‑binding ATP‑dependent protease La

CGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAATC  >  minE/288953‑289000 |                                                cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3053852/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:344892/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:337013/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3283490/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3239769/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3224148/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3193340/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3153533/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3129092/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3087532/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3075352/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:361426/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:3038182/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2916078/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2913250/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2894968/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2840656/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2840553/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2824161/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2803610/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2748510/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2716919/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:693004/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:96929/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:958473/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:950257/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:917391/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:901900/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:870045/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:865622/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:865403/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:725430/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:709682/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1080698/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:669102/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:654000/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:651641/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:598405/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:565205/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:514719/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:468312/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:422923/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:417079/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:364176/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1435684/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2714051/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2024440/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1983946/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1976917/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1790799/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1685907/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1675473/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1599230/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1564075/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1492279/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1488877/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2078745/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:142354/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1315155/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1296327/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1217369/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1165945/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1165203/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1144422/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1119147/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1110666/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1098546/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:1020948/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2461531/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2708245/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:266919/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2618109/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:260770/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:257089/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2552357/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2521707/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2517557/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2511550/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2085544/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2404893/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2357610/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2321764/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:23092/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2280684/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2150909/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2144669/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAtc  >  1:2137597/1‑48 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAt   >  1:2985168/1‑47 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAt   >  1:409258/1‑47 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAt   >  1:2794874/1‑47 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAAt   >  1:336616/1‑47 (MQ=255) cGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCGGGAGCGTGAAAtc  >  1:3224462/1‑48 (MQ=255) |                                                CGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAATC  >  minE/288953‑289000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑