Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	724604	724646	43	58 [0]	[1] 55	rluC	23S rRNA pseudouridylate synthase

TTGCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAGGG  >  minE/724645‑724707   |                                                             ttGCTGGTAGCGAAAAAACGCTCGGCGTT‑CGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1957051/62‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGTAAAAggg  <  1:196770/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:440691/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2712943/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2720623/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2889885/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2929135/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2953725/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:297589/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:3025504/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:3148300/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:3170044/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:3201337/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:3208745/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:3245326/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:388666/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2576257/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:453303/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:564047/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:571538/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:578453/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:599257/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:669134/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:731832/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:733310/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:796157/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:803997/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:902339/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2149407/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1342717/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1349926/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1660305/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1665311/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1668551/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1769346/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1778281/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1786458/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1941670/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1954137/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2011500/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2057300/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2630098/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2189958/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2302926/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2334883/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2377288/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2396187/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2401334/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2415318/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2422736/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2468527/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2522478/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1331470/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCGTTGCGTGCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:1708301/61‑1 (MQ=255)   gCTGGTAGCGAAAAAACGCTCGGCCTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAggg  <  1:2691513/61‑1 (MQ=255)   |                                                             TTGCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAGGG  >  minE/724645‑724707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑