Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1016359	1016378	20	32 [0]	[0] 55	manA	mannose‑6‑phosphate isomerase

TGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACT  >  minE/1016379‑1016439 |                                                             tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:3255278/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2832812/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2834025/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2863725/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:288020/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2892347/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:296459/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2992466/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:3002547/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:3034306/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:3036979/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:3144278/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:3149063/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:3253578/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2805037/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:3259324/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:363676/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:383808/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:388209/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:57485/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:775426/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:793622/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:844876/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:91135/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:915961/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:97746/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:980137/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1813593/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1158710/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1196590/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1222797/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1225115/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1242042/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1285949/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1447544/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1555574/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1592571/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1605918/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1662767/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1685180/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1768506/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1042146/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1922212/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:1980822/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2094833/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2124077/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2149904/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2248357/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2291004/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2614946/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2696302/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:272966/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2769336/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACt  <  1:2778791/61‑1 (MQ=255) tGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCCTTTCACt  <  1:2887025/61‑1 (MQ=255) |                                                             TGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACT  >  minE/1016379‑1016439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑