Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1024609	1024611	3	7 [0]	[0] 47	uidR	DNA‑binding transcriptional repressor

ACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAA  >  minE/1024612‑1024673 |                                                              aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:3003421/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1148865/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2325030/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2393668/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2522353/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2541289/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2584860/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2701823/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2746172/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2871727/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2921815/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2926791/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2305106/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:3131126/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:3138987/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:3223731/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:387791/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:487502/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:508664/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:523983/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:638993/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:768831/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:968069/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1549702/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1158705/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1184120/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1218142/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1274126/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1287297/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1308793/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1323073/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1430409/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1511165/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2276466/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1576095/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1616330/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1687590/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1709550/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1729878/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1733607/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1745899/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:1794880/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2123700/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2169804/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:2262628/62‑1 (MQ=255) aCTAATGGCGCAAGATTTACAGATGGCATTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:789797/62‑1 (MQ=255) aCTAATCGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaa  <  1:482730/62‑1 (MQ=255) |                                                              ACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAA  >  minE/1024612‑1024673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑