Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1059582	1059648	67	69 [0]	[0] 29	lhr	predicted ATP‑dependent helicase

CAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAA  >  minE/1059649‑1059710 |                                                              cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTGTTGCAGTaaa  <  1:1653732/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:2906069/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:90492/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:824951/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:712725/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:658814/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:575376/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:542650/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:507428/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:375614/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:3257931/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:324975/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:3065825/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:3061772/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:2930358/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:1341183/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:2730492/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:247748/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:231313/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:1986042/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:1915814/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:188044/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:1872650/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:1858833/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:1789560/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:175426/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:1736158/62‑1 (MQ=255) cAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:1550528/62‑1 (MQ=255) cAACGGCATACAGGAAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTaaa  <  1:3075813/62‑1 (MQ=255) |                                                              CAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAA  >  minE/1059649‑1059710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑