Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1160422	1160486	65	76 [0]	[1] 50	xthA	exonuclease III

TAAAATTCCCGGCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAACCGAACTC  >  minE/1160477‑1160538           |                                                    tAAAATTCCCGGCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAACCGAACTc  <  1:2922022/62‑1 (MQ=255)           ggCAAAATCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2911431/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:350290/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2689387/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2795553/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2866012/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2881859/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2893565/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2896718/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:3055146/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:3127175/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:3214627/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:3264032/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2668568/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:385883/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:443704/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:492162/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:520022/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:811735/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:838753/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:898468/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:913224/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:972492/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:988285/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:990743/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2053597/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1024012/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1290652/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1405839/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1443355/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1444663/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:154014/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1587104/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1755578/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1815577/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1906682/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:193221/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2046978/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:1016447/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2090448/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:212408/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:214899/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:21675/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2308593/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2369276/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2391720/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2476061/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2486303/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2515248/46‑1 (MQ=255)           ggCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAAcc        <  1:2599273/46‑1 (MQ=255)           |                                                    TAAAATTCCCGGCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAACCGAACTC  >  minE/1160477‑1160538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑