Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1206513	1206522	10	47 [0]	[0] 9	manX	fused mannose‑specific PTS enzyme IIAB components

ATGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTG  >  minE/1206523‑1206584 |                                                              aTGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACtc  >  1:3000866/1‑61 (MQ=255) aTGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACt   >  1:2727903/1‑61 (MQ=255) aTGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACt   >  1:84413/1‑61 (MQ=255) aTGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTg  >  1:1979935/1‑62 (MQ=255) aTGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTg  >  1:232153/1‑62 (MQ=255) aTGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTg  >  1:2412313/1‑62 (MQ=255) aTGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTg  >  1:283109/1‑62 (MQ=255) aTGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTg  >  1:2976566/1‑62 (MQ=255) aTGTCTCCCGTATTATTGCTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTg  >  1:1883764/1‑62 (MQ=255) |                                                              ATGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTG  >  minE/1206523‑1206584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑