Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	99771	99784	14	53 [0]	[0] 50	hofC	assembly protein in type IV pilin biogenesis, transmembrane protein

AGCAGAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAT  >  minE/99785‑99846 |                                                              agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTc    >  1:2867342/1‑60 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCa   >  1:390634/1‑61 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:3234324/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1022055/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:240288/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:2660159/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:2976191/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:3036049/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:3062931/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:3115107/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:313791/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:3149802/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:3230873/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:2326146/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:3234967/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:365976/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:433762/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:476134/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:537285/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:728171/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:849711/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:971073/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:974700/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:995530/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1578911/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1041813/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1121280/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1144234/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1183993/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1198740/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1217864/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1222885/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1252097/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1300504/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1463201/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1517697/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:2310561/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:160983/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1633727/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1700658/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1755375/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1778707/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1803578/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1815766/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1902791/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:1913584/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:2050949/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:2194862/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGCAGCCAGCTACATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:699712/1‑62 (MQ=255) agcagAAAGCCGAACAACACCAGAAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAt  >  1:3077155/1‑62 (MQ=255) |                                                              AGCAGAAAGCCGAACAACACCAGCAGCCAGCTCCATTCGCCACTAAAGTCTGCCAGCGTCAT  >  minE/99785‑99846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑