Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1410098	1410158	61	11 [0]	[0] 25	bcr	bicyclomycin/multidrug efflux system

AGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGA  >  minE/1410159‑1410220 |                                                              aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCTTCAAGAATGACCGCCATCGCATTGGa  <  1:2141856/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGAGCGCCATCGCATTGGa  <  1:354500/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:2261581/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:874239/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:772872/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:707899/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:687749/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:637798/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:52945/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:337202/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:287858/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:2849267/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:2382403/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:2328214/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:100790/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1917932/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1765299/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1740153/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1705752/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:15978/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1531811/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1419635/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1315898/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1228546/62‑1 (MQ=255) aGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGa  <  1:1035075/62‑1 (MQ=255) |                                                              AGCGAAGATGCCGTTCCCGCCATATGGGGAAACTCATCAAGAATGACCGCCATCGCATTGGA  >  minE/1410159‑1410220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑