Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1442110	1442147	38	52 [0]	[0] 76	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

TTCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCG  >  minE/1442148‑1442209 |                                                              ttCTCGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2614287/1‑62 (MQ=255) ttCACGATCAGGAATCGATCCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1056009/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACaa                        >  1:241585/1‑40 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAAt                     >  1:1346475/1‑43 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTg                   >  1:261470/1‑45 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTTCCGATCATTTGCTGCCg  >  1:623363/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGa               >  1:2996945/1‑49 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGAt              >  1:1443405/1‑50 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTtgctggca  >  1:1108835/1‑59 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGcc   >  1:211370/1‑61 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGcc   >  1:2202189/1‑61 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGcc   >  1:1515241/1‑61 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGGCg  >  1:1283318/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGGCg  >  1:1569754/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:3064007/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:3063115/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:307588/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:3049544/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:3017538/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:285217/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2940040/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:404308/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2825842/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2766119/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2739901/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:263594/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:899918/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:572343/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:843112/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:779892/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:750492/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:707872/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:683241/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:642417/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:61714/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:610345/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:3087646/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:543715/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:532420/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:528480/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:503404/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1012511/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:366242/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:3280999/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1649370/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1076917/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1093075/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1126676/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1218934/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1252727/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1290454/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1311249/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1335311/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1350566/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1350738/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1440366/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1441441/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1523621/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1526590/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1536521/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2550238/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:1740454/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:178833/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2008877/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2040613/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2114232/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2117549/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:213213/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:21493/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2231083/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2277028/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2365196/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2383728/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:242769/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCg  >  1:2491169/1‑62 (MQ=255) ttCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTACTGCCg  >  1:2089839/1‑62 (MQ=255) |                                                              TTCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCG  >  minE/1442148‑1442209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑