Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1532108	1532274	167	23 [0]	[0] 52	aroC	chorismate synthase

TACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGTT  >  minE/1532275‑1532336 |                                                              tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:395543/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1275786/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:261376/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2742343/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2751231/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2768865/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2842121/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2850828/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2884963/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:3027085/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:3091129/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:3119802/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:3234271/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2539432/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:443741/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:455201/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:482221/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:491791/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:560634/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:574774/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:70098/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:758246/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:774066/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:793280/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:813952/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:924911/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1841271/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1284755/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1286183/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1335864/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1362393/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1364992/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1491188/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1562823/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1683682/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1737571/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:17517/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1784828/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1806889/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2534116/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:1883032/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2009027/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2020637/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2099876/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2119328/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2211232/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2223408/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2300475/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2395880/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2411650/62‑1 (MQ=255) tACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:245368/62‑1 (MQ=255) tACCAAATATCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGtt  <  1:2807053/62‑1 (MQ=255) |                                                              TACCAAATTTCTCGGCGAGATATTTTTTGGCAATAGCTCCTGCCGCCACGCGCATGGCGGTT  >  minE/1532275‑1532336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑