Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1554387	1554388	2	21 [1]	[0] 64	dsdX	predicted transporter

TTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGT  >  minE/1554389‑1554444 |                                                        ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAagc        >  1:2714905/1‑50 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:305562/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1035578/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:227839/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2393608/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2396660/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2400790/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2436633/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2488322/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2687108/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2820000/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2820640/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2879108/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2961322/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2995070/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:3048763/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2228726/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:3144789/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:3188948/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:3269274/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:3293290/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:3296591/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:359093/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:359756/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:392170/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:552648/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:572927/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:670673/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:674431/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:697331/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:745104/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:879108/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1405003/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1042985/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1053154/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1107256/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1151747/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1158420/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1179930/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1218713/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1228537/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1251362/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1351142/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1362038/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1367242/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1399180/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1400068/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:222246/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1449584/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1568254/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1585135/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1628094/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1629307/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1770857/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1914398/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1921732/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1945920/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:195279/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1972917/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:1984922/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2067882/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2171241/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGt  >  1:2197624/1‑56 (MQ=255) ttttGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCAATTTAAAAAGCAGCAGt  >  1:384638/1‑56 (MQ=255) |                                                        TTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGT  >  minE/1554389‑1554444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑