| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 207103 = | NA (NA) | 8 (0.140) | 5/114 | 2.9 | NA | noncoding (2520/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | minE | 207128 = | NA (NA) | noncoding (2545/2904 nt) | rrlH | 23S ribosomal RNA | |||||
CGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/207175‑207103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCTA > minE/207128‑207197 CGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCA < 1:659717/71‑1CGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCA < 1:1241986/71‑1CGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCA < 1:451406/71‑1CGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCA < 1:1540618/71‑1CGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCA < 1:2135642/71‑1 TTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGG < 1:644800/71‑1 TCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCTCCA > 1:1698968/1‑68 AAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCA < 1:3145787/65‑1 CTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAG < 1:3017232/58‑1 CTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAG < 1:1890097/58‑1 GTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCA < 1:2834075/52‑1 CACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAG > 1:504820/1‑49 AACAGCCATACCCTTGGGACCGGCTACAGCCCCAGG > 1:1450805/1‑36 TACCCTTGGGACCTACTTCAGCCCCAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTT > 1:1734360/1‑69 ACCCTTGGGACCTACTTCAGCTCCAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTT > 1:1151597/1‑68 ACCCTTGGGACCTACTTCAGCTCCAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTT > 1:426267/1‑68 CTTGGGACCTACTTCAGCCCCAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAAC > 1:2157836/1‑71 CTTGGGACCTACTTCAGCCCCAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAAC > 1:2097888/1‑71 CTTGGGACCTACTTCAGCCCCAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAAC > 1:2901670/1‑71 TTGGGACCTACTTCAGCCCCAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACG > 1:2221701/1‑71 CTTCAGCCCCAGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGA < 1:1175655/69‑1 AGGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCC < 1:1047173/71‑1 GGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCT < 1:2507962/71‑1 GGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCT < 1:1475930/71‑1 GGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCT < 1:91330/71‑1 GGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGG > 1:1639398/1‑40 GGGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGG > 1:1578477/1‑40 GGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCTA < 1:1571555/71‑1 GGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCTA > 1:57578/1‑71 GGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCT < 1:1216972/70‑1 GGTATGACTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCTA > 1:7315/1‑71 CGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/207175‑207103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCTA > minE/207128‑207197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |