| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1390795 = | 91 (1.520) | 14 (0.270) | 6/106 | 2.5 | 16.3% | intergenic (+69/+356) | nfo/fruA | endonuclease IV with intrinsic 3'‑5' exonuclease activity/fused fructose‑specific PTS enzyme IIB'BC components |
| ? | minE | 1390821 = | 64 (1.220) | intergenic (+95/+330) | nfo/fruA | endonuclease IV with intrinsic 3'‑5' exonuclease activity/fused fructose‑specific PTS enzyme IIB'BC components | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCTCTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTTTAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1390871‑1390795‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttaaacATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTTGAG > minE/1390821‑1390890 CCTCTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGT < 1:560562/71‑1CCTCTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGT > 1:2585662/1‑71CCTCTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGT < 1:2023687/71‑1 TCTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTT > 1:971303/1‑70 CTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTTT > 1:2217555/1‑70 CTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTTT > 1:2168177/1‑70 CTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTTT > 1:2078429/1‑70 TGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTTTA < 1:2494281/68‑1 AATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTTT > 1:689144/1‑60 ATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTTTA < 1:732539/60‑1 TTAAATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTTT < 1:1576175/48‑1 TTAAATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTTT < 1:3169315/48‑1 AAATATGAACACATGTTTAAACATGTGCTCATAGTATGCATat < 1:2526543/43‑3 AAATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGT < 1:535623/43‑1 AATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTTTACGTAAAGT < 1:1751885/54‑1 AATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTTTACGTAAAGT < 1:806725/54‑1 AATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTTTACGTAAAGT < 1:534570/54‑1 AATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGT < 1:183306/42‑1 ATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTT > 1:2883922/1‑43 ATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTT > 1:534517/1‑43 ATATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTT > 1:265359/1‑43 TATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACC < 1:752304/60‑1 TATGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACC < 1:2493727/60‑1 TGAACACATGTTTAAACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGC > 1:1520350/1‑60 TTTAAACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAG > 1:684301/1‑55 AAACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTT > 1:351185/1‑71 AACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTT < 1:7566/70‑1 AACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTT < 1:2772794/70‑1 AACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTT < 1:3057100/70‑1 AACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTT < 1:1990283/70‑1 ACATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAG < 1:1383573/50‑1 CATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTTGAG < 1:1005409/71‑1 CATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTTGAG < 1:828548/71‑1 CATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTTGAG < 1:1219001/71‑1 CCTCTCTGGCGGTAATTTACTTTACGTAAAACATGCATACTATGAGCACATGTTTAAATATGAACACATGTTTAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1390871‑1390795‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttaaacATGTGCTCATAGTATGCATGTTTTACGTAAAGTAAATTACCGCCAGAGAGGCAAAATGGGCAGATTTGAG > minE/1390821‑1390890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |